Xrcc5 (NM_009533) Mouse Tagged ORF Clone

  • TrueORF®
SKU
MR210341
Xrcc5 (Myc-DDK-tagged) - Mouse X-ray repair complementing defective repair in Chinese hamster cells 5 (Xrcc5)
$589.00 $670.00
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Specifications
Specifications
Product Data
Type Mouse Tagged ORF Clone
Target Symbol Xrcc5
Synonyms AI314015; CTC85; CTCBF; Ku80; Ku86
Vector pCMV6-Entry
E. coli Selection Kanamycin (25 ug/mL)
Mammalian Cell Selection Neomycin
Sequence Data
ORF Nucleotide Sequence
>MR210341 representing NM_009533
Red=Cloning site Blue=ORF Green=Tags(s)

TTTTGTAATACGACTCACTATAGGGCGGCCGGGAATTCGTCGACTGGATCCGGTACCGAGGAGATCTGCC
GCCGCGATCGCC

ATGGCGTGGTCCGGTAATAAGGCAGCTGTTGTGCTGTGTGTGGATGTGGGGGTTGCCATGGGTAACTCCT
TTCCTGGTGAAGAATCTCCAATTGAACAAGCAAAGAAAGTGATGACTATGTTTGTCCAACGACAGGTATT
TTCGGAGAGCAAAGATGAGATTGCGTTAGTCCTCTATGGCACAGATGGCACTGATAATGCCCTTGCTGGC
AAGGACCAGTATCAGAACATCACAGTGTGCAGACACCTGATGCTACCAGATTTTGATTTGCTGGAAGACA
TCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGATTT
GATTCAGCGTGAAACCATAGGGAAGAAGTTTGGGAAGAAGCATATTGAAGTGTTCACTGACCTCAGCAGC
CCGTTCAGCCAGGACCAACTGGACGTTATAATTTGTAACTTGAAGAAGTCTGGCATCTCTCTGCAGTTCT
TTTTGCCTTTTCCAATCGACAAGAATGGCGAGCCTGGCGAGAGAGGGGACCTGGACTCTGGCTTGGACCA
CCTCAAACCCTCCTTCCCTCAAAAAGGACTTACTGAGCAGCAAAAGGAAGGCATCCGCATGGTGACAAGG
GTGATGCTGTCCTTAGAAGGCGAAGACGGGCTGGATGAAATTTATTCCTTCAGTGAGAGTCTACGACAAC
TGTGCGTCTTTAAGAAGATTGAGAGGCGTTCCATGCCCTGGCCCTGCCAACTGACCATTGGCCCCAACTT
GTCTATAAAGATTGTAGCCTATAAATCGATTGTACAGGAGAAATTTAAGAAGAGTTGGGTAGTTGTGGAC
GCAAGAACGCTAAAGAAGGAAGATATACAAAAAGAGACTGTTTATTGCCTAAATGACGATGATGAAACTG
AAGTTTCCAAAGAGGACACTATTCAAGGGTACCGCTACGGAAGTGATATCATTCCTTTTTCTAAAGTGGA
TGAGGAACAAATGAAATATAAATCTGAGGGGAAGTGCTTCTCTGTTTTGGGATTTTGTAAATCTTCTCAG
GTTCATAGAAGATTCTTCATGGGACATCAAGTTCTAAAGGTCTTTGCAGCAAAGGATGATGAGGCGGCAG
CTGTTGCCCTTTCCTCTCTCGTTCATGCTTTGGATGAGTTAAACATGGTCGCCATCGTCCGATATGCTTA
TGACAAAAGATCTAATCCTCAAGTTGGTGTAGCCTTCCCTTACATTAAGGACGCCTATGAGTGTTTAGTT
TATGTGCAGCTGCCTTTCATGGAAGACTTGCGGCAATACATGTTTTCCTCGCTGAAAAACAATAAGAAGT
GCACTCCCACAGAGGCCCAGCTGAGCGCTATTGATGATCTGATTGATTCCATGAGCTTGGTAAAGAAAAA
CGAGGAAGAAGACATTGTTGAAGATTTGTTTCCAACCTCCAAAATTCCAAATCCTGAATTTCAGCGATTG
TACCAGTGTCTGCTGCATAGAGCCTTACATCTCCAGGAGCGGCTGCCCCCGATTCAGCAGCACATTTTGA
ATATGCTGGATCCCCCCACTGAGATGAAAGCAAAATGTGAGAGTCCACTCTCTAAAGTAAAGACCCTTTT
CCCTCTCACAGAAGTCATCAAGAAAAAGAACCAAGTGACTGCTCAGGACGTTTTCCAAGACAATCATGAA
GAGGGGCCCGCTGCTAAAAAATATAAAACTGAGAAAGAAGAAGATCACATCAGCATCTCCAGCCTGGCAG
AAGGGAACATCACCAAGGTTGGAAGTGTGAATCCTGTTGAAAACTTCCGTTTCCTAGTAAGACAGAAGAT
TGCCAGCTTTGAGGAAGCGAGTCTCCAGTTAATAAGTCACATCGAACAATTTTTGGATACCAATGAAACA
CTGTATTTTATGAAAAGTATGGACTGCATCAAAGCTTTCCGGGAGGAGGCCATTCAGTTTTCAGAAGAAC
AGCGCTTCAACAGCTTCCTGGAAGCCCTTCGAGAGAAAGTGGAAATTAAGCAATTAAATCATTTCTGGGA
AATTGTTGTTCAGGATGGAGTTACTCTGATCACCAAAGACGAAGGCCCAGGAAGCTCTATCACAGCTGAG
GAAGCCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGAAGCTGGTG
ATGTGGATGATTTACTGGACATGATA


ACGCGTACGCGGCCGCTCGAGCAGAAACTCATCTCAGAAGAGGATCTGGCAGCAAATGATATCCTGGATT
ACAAGGATGACGACGATAAG
GTTTAA
Protein Sequence
>MR210341 representing NM_009533
Red=Cloning site Green=Tags(s)

MAWSGNKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTDNALAG
KDQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIGKKFGKKHIEVFTDLSS
PFSQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTR
VMLSLEGEDGLDEIYSFSESLRQLCVFKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKFKKSWVVVD
ARTLKKEDIQKETVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQ
VHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRSNPQVGVAFPYIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDDLIDSMSLVKKNEEEDIVEDLFPTSKIPNPEFQRL
YQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCESPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHE
EGPAAKKYKTEKEEDHISISSLAEGNITKVGSVNPVENFRFLVRQKIASFEEASLQLISHIEQFLDTNET
LYFMKSMDCIKAFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAE
EATKFLAPKDKAKEDTTGPEEAGDVDDLLDMI

TRTRPLEQKLISEEDLAANDILDYKDDDDKV
Chromatograms Chromatograms
Sequencher program is needed, download here
Restriction Sites SgfI-MluI Cloning Scheme for this gene | Plasmid Map
ACCN NM_009533
ORF Size 2196 bp
OTI Disclaimer The molecular sequence of this clone aligns with the gene accession number as a point of reference only. However, individual transcript sequences of the same gene can differ through naturally occurring variations (e.g. polymorphisms), each with its own valid existence. This clone is substantially in agreement with the reference, but a complete review of all prevailing variants is recommended prior to use. More info
OTI Annotation This clone was engineered to express the complete ORF with an expression tag. Expression varies depending on the nature of the gene.
Components The ORF clone is ion-exchange column purified and shipped in a 2D barcoded Matrix tube containing 10ug of transfection-ready, dried plasmid DNA (reconstitute with 100 ul of water).
Reconstitution Method 1. Centrifuge at 5,000xg for 5min.
2. Carefully open the tube and add 100ul of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin (less than 5000xg) to concentrate the liquid at the bottom.
5. Store the suspended plasmid at -20°C. The DNA is stable for at least one year from date of shipping when stored at -20°C.
Note Plasmids are not sterile.  For experiments where strict sterility is required, filtration with 0.22um filter is required.
Shipping Ambient
Reference Data
RefSeq NM_009533.2, NP_033559.2
RefSeq Size 2571 bp
RefSeq ORF 2199 bp
Locus ID 22596
UniProt ID P27641
Cytogenetics 1 36.5 cM
MW 83.5 kDa
Summary Single-stranded DNA-dependent ATP-dependent helicase. Has a role in chromosome translocation. The DNA helicase II complex binds preferentially to fork-like ends of double-stranded DNA in a cell cycle-dependent manner. It works in the 3'-5' direction. Binding to DNA may be mediated by XRCC6. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair and V(D)J recombination. The XRCC5/6 dimer acts as regulatory subunit of the DNA-dependent protein kinase complex DNA-PK by increasing the affinity of the catalytic subunit PRKDC to DNA by 100-fold. The XRCC5/6 dimer is probably involved in stabilizing broken DNA ends and bringing them together. The assembly of the DNA-PK complex to DNA ends is required for the NHEJ ligation step. In association with NAA15, the XRCC5/6 dimer binds to the osteocalcin promoter and activates osteocalcin expression. The XRCC5/6 dimer probably also acts as a 5'-deoxyribose-5-phosphate lyase (5'-dRP lyase), by catalyzing the beta-elimination of the 5' deoxyribose-5-phosphate at an abasic site near double-strand breaks. XRCC5 probably acts as the catalytic subunit of 5'-dRP activity, and allows to 'clean' the termini of abasic sites, a class of nucleotide damage commonly associated with strand breaks, before such broken ends can be joined. The XRCC5/6 dimer together with APEX1 acts as a negative regulator of transcription. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent innate immune response activation through the cGAS-STING pathway.UniProtKB/Swiss-Prot Function
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Documents
Resources
"NM_009533" in other vectors (4)
SKU Description Size Price
MC202035 Xrcc5 (untagged) - Mouse X-ray repair complementing defective repair in Chinese hamster cells 5 (Xrcc5), (10ug) 10 ug
$671.00
MG210341 Xrcc5 (tGFP-tagged) - Mouse X-ray repair complementing defective repair in Chinese hamster cells 5 (Xrcc5) 10 ug
$870.00
MR210341L3 Lenti ORF clone of Xrcc5 (Myc-DDK-tagged) - Mouse X-ray repair complementing defective repair in Chinese hamster cells 5 (Xrcc5) 10 ug
$970.00
MR210341L4 Lenti ORF clone of Xrcc5 (mGFP-tagged) - Mouse X-ray repair complementing defective repair in Chinese hamster cells 5 (Xrcc5) 10 ug
$970.00

Plasmid Map for MR210341

Download sequence for

Cloning scheme for MR210341

Circular map for MR210341

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