TDP43 (TARDBP) (NM_007375) Human Tagged ORF Clone

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SKU
RC210639
TARDBP (Myc-DDK-tagged)-Human TAR DNA binding protein (TARDBP)
  $457.00
In Stock*
Specifications
Specifications
Product Data
Type Human Tagged ORF Clone
Target Symbol TDP43
Synonyms ALS10; TDP-43
Vector pCMV6-Entry
E. coli Selection Kanamycin (25 ug/mL)
Mammalian Cell Selection Neomycin
Sequence Data
ORF Nucleotide Sequence
>RC210639 ORF sequence
Red=Cloning site Blue=ORF Green=Tags(s)

TTTTGTAATACGACTCACTATAGGGCGGCCGGGAATTCGTCGACTGGATCCGGTACCGAGGAGATCTGCC
GCCGCGATCGCC

ATGTCTGAATATATTCGGGTAACCGAAGATGAGAACGATGAGCCCATTGAAATACCATCGGAAGACGATG
GGACGGTGCTGCTCTCCACGGTTACAGCCCAGTTTCCAGGGGCGTGTGGGCTTCGCTACAGGAATCCAGT
GTCTCAGTGTATGAGAGGTGTCCGGCTGGTAGAAGGAATTCTGCATGCCCCAGATGCTGGCTGGGGAAAT
CTGGTGTATGTTGTCAACTATCCAAAAGATAACAAAAGAAAAATGGATGAGACAGATGCTTCATCAGCAG
TGAAAGTGAAAAGAGCAGTCCAGAAAACATCCGATTTAATAGTGTTGGGTCTCCCATGGAAAACAACCGA
ACAGGACCTGAAAGAGTATTTTAGTACCTTTGGAGAAGTTCTTATGGTGCAGGTCAAGAAAGATCTTAAG
ACTGGTCATTCAAAGGGGTTTGGCTTTGTTCGTTTTACGGAATATGAAACACAAGTGAAAGTAATGTCAC
AGCGACATATGATAGATGGACGATGGTGTGACTGCAAACTTCCTAATTCTAAGCAAAGCCAAGATGAGCC
TTTGAGAAGCAGAAAAGTGTTTGTGGGGCGCTGTACAGAGGACATGACTGAGGATGAGCTGCGGGAGTTC
TTCTCTCAGTACGGGGATGTGATGGATGTCTTCATCCCCAAGCCATTCAGGGCCTTTGCCTTTGTTACAT
TTGCAGATGATCAGATTGCGCAGTCTCTTTGTGGAGAGGACTTGATCATTAAAGGAATCAGCGTTCATAT
ATCCAATGCCGAACCTAAGCACAATAGCAATAGACAGTTAGAAAGAAGTGGAAGATTTGGTGGTAATCCA
GGTGGCTTTGGGAATCAGGGTGGATTTGGTAATAGCAGAGGGGGTGGAGCTGGTTTGGGAAACAATCAAG
GTAGTAATATGGGTGGTGGGATGAACTTTGGTGCGTTCAGCATTAATCCAGCCATGATGGCTGCCGCCCA
GGCAGCACTACAGAGCAGTTGGGGTATGATGGGCATGTTAGCCAGCCAGCAGAACCAGTCAGGCCCATCG
GGTAATAACCAAAACCAAGGCAACATGCAGAGGGAGCCAAACCAGGCCTTCGGTTCTGGAAATAACTCTT
ATAGTGGCTCTAATTCTGGTGCAGCAATTGGTTGGGGATCAGCATCCAATGCAGGGTCGGGCAGTGGTTT
TAATGGAGGCTTTGGCTCAAGCATGGATTCTAAGTCTTCTGGCTGGGGAATG


ACGCGTACGCGGCCGCTCGAGCAGAAACTCATCTCAGAAGAGGATCTGGCAGCAAATGATATCCTGGATT
ACAAGGATGACGACGATAAG
GTTTAA
Protein Sequence
>RC210639 protein sequence
Red=Cloning site Green=Tags(s)

MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGN
LVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLK
TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREF
FSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNP
GGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPS
GNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM

TRTRPLEQKLISEEDLAANDILDYKDDDDKV
Chromatograms Chromatograms
Sequencher program is needed, download here
Restriction Sites SgfI-MluI Cloning Scheme for this gene | Plasmid Map
ACCN NM_007375
ORF Size 1242 bp
OTI Disclaimer The molecular sequence of this clone aligns with the gene accession number as a point of reference only. However, individual transcript sequences of the same gene can differ through naturally occurring variations (e.g. polymorphisms), each with its own valid existence. This clone is substantially in agreement with the reference, but a complete review of all prevailing variants is recommended prior to use. More info
OTI Annotation This clone was engineered to express the complete ORF with an expression tag. Expression varies depending on the nature of the gene.
Components The ORF clone is ion-exchange column purified and shipped in a 2D barcoded Matrix tube containing 10ug of transfection-ready, dried plasmid DNA (reconstitute with 100 ul of water).
Reconstitution Method 1. Centrifuge at 5,000xg for 5min.
2. Carefully open the tube and add 100ul of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin (less than 5000xg) to concentrate the liquid at the bottom.
5. Store the suspended plasmid at -20°C. The DNA is stable for at least one year from date of shipping when stored at -20°C.
Note Plasmids are not sterile.  For experiments where strict sterility is required, filtration with 0.22um filter is required.
Shipping Ambient
Reference Data
RefSeq NM_007375.4
RefSeq Size 4236 bp
RefSeq ORF 1245 bp
Locus ID 23435
UniProt ID Q13148
Cytogenetics 1p36.22
Domains RRM
Protein Families Transcription Factors
MW 44.7 kDa
Summary HIV-1, the causative agent of acquired immunodeficiency syndrome (AIDS), contains an RNA genome that produces a chromosomally integrated DNA during the replicative cycle. Activation of HIV-1 gene expression by the transactivator Tat is dependent on an RNA regulatory element (TAR) located downstream of the transcription initiation site. The protein encoded by this gene is a transcriptional repressor that binds to chromosomally integrated TAR DNA and represses HIV-1 transcription. In addition, this protein regulates alternate splicing of the CFTR gene. A similar pseudogene is present on chromosome 20. provided by RefSeq, Jul 2008
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Documents
Resources
"NM_007375" in other vectors (7)
SKU Description Size Price
RC210639L1 Lenti ORF clone of Human TAR DNA binding protein (TARDBP), Myc-DDK-tagged 10 ug
$757.00
RC210639L2 Lenti ORF clone of Human TAR DNA binding protein (TARDBP), mGFP tagged 10 ug
$757.00
RC210639L3 Lenti ORF clone of Human TAR DNA binding protein (TARDBP), Myc-DDK-tagged 10 ug
$757.00
RC210639L4 Lenti ORF clone of Human TAR DNA binding protein (TARDBP), mGFP tagged 10 ug
$757.00
RG210639 TARDBP (tGFP-tagged) - Human TAR DNA binding protein (TARDBP) 10 ug
$489.00 $657.00
SC115570 TARDBP (untagged)-Human TAR DNA binding protein (TARDBP) 10 ug
$686.00
SC322765 TARDBP (untagged)-Human TAR DNA binding protein (TARDBP) 10 ug
$686.00

Plasmid Map for RC210639

Download sequence for

Cloning scheme for RC210639

Circular map for RC210639

file-alt Citations

TDP-43 mislocalization drives neurofilament changes in a novel model of TDP-43 proteinopathy
Atkinson, Leung, Bender et al
Dis Model Mech (2021)
Cited by 14
AI Summary: OriGene’s plasmid RC210639 (TARDBP insert, cloned into pLenti-C-mGFP PS100071) was used as the source of human TDP-43 for generating both wildtype and mutant constructs, enabling the study of TDP-43 mislocalization and its effects in a new mouse model of proteinopathy.
Snippet: Page 14. plasmid (RC210639 TARDBP insert, cloned into pLenti-C-mGFP PS100071, Origene Technologies) was purchased, and site-directed mutagenesis of the human TDP-43 protein sequence was used to create a defective NLS through a missense mutation
TDP-43 mutations link Amyotrophic Lateral Sclerosis with R-loop homeostasis and R loop-mediated DNA damage
Giannini, Bayona-Feliu, Sproviero et al
PLoS Genet (2020) 16 (12), e1009260 DOI: 10.1371/journal.pgen.1009260
Cited by 112
AI Summary: OriGene contributed to this study by providing the TDP-43 G294V mutant plasmid (PS100010), which was used to investigate the effects of TDP-43 mutations on R-loop accumulation and genome instability.
Snippet: changed from G to T, to obtain G294V, inserted in PS100010), purchased from OriGene
TDP-43 deficiency links Amyotrophic Lateral Sclerosis with R-loop homeostasis and R loop-mediated DNA damage
Giannini, Sproviero, Bayona-Feliu et al
bioRxiv (2020)
Cited by 10
Snippet: GFP) and C-terminally GFP-tagged TDP-43 A382T mutation vector (CW303334 Mutate ORF of RC210639 at nt position 1144, to nr change G to A,to achieve A382T, keep insert in PS100001), purchased from OriGene. During the paper the SH-SY5Y are respectively
Truncation of the TAR DNA-binding protein 43 is not a prerequisite for cytoplasmic relocalization, and is suppressed by caspase inhibition and by introduction of the A90V sequence variant
Wobst, Delsing, Brandon et al
PLoS ONE (2017) 12 (5), e0177181 DOI: 10.1371/journal.pone.0177181
AI Summary: OriGene contributed N-terminally myc-tagged wild-type and mutant human TDP-43 (TARDBP) plasmids, which were used in this study to investigate the effects of TDP-43 truncation and the A90V sequence variant on cytoplasmic relocalization and caspase-mediated cleavage.
Snippet: 3:1, for 24 hours. Plasmids harboring N-terminally myc-tagged wild-type or mutant human TDP-43 sequences (TARDBP, wild-type reference sequence NM_007375.3) were purchased from Origene. The presence of the A90V ... All 4 versions Cite SaveSaving
FigureFigureFigure
Flow cytometric measurement of the cellular propagation of TDP-43 aggregation
Zeineddine, Whiten, Farrawell et al
Prion (2017)
AI Summary: OriGene contributed to this study by providing the pCMV6-AC-tGFP expression vector containing TDP-43 WT cDNA, which was used for transient transfection to analyze TDP-43 aggregation and propagation.
Snippet: Cells were maintained in an incubator at 37°C under a humidified atmosphere containing 5% (v/v) CO 2 . Transient Transfections. The pCMV6-AC-tGFP expression vector containing TDP-43 WT cDNA was obtained from Origene. ... All 2 versions Cite SaveSaving
Cytoplasmic Relocalization of TAR DNA-Binding Protein 43 Is Not Sufficient to Reproduce Cellular Pathologies Associated with ALS In vitro
Wobst, Wesolowski, Chadchankar et al
Front Mol Neurosci (2017) 10, 46 DOI: 10.3389/fnmol.2017.00046
AI Summary: OriGene contributed to this study by providing and customizing plasmids, including those with the A90V and M337V TDP-43 mutations, enabling the researchers to investigate the effects of these specific variants on TDP-43 localization and pathology.
Snippet: Materials and Methods. Plasmids. All plasmids were purchased from and customized by Origene. ... Custom mutagenesis to generate the A90V (point mutation c.269C>T) and M337V (point mutation c.1009A>G) TDP-43 amino acid substitutions were carried out by Origene ... All 5 versions Cite SaveSaving
FigureFigureFigure
Showing 1-6 of 7 papers.
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