PCDHB16 (NM_020957) Human Untagged Clone

SKU SC108036

PCDHB16 (untagged)-Human protocadherin beta 16 (PCDHB16)

Product Data

• Type: Human Untagged Clone
• Target Symbol: PCDHB16
• Synonyms: ME1; PCDH-BETA16; PCDH3X; PCDHB8a
• Vector: pCMV6-XL4
• E. coli Selection: Ampicillin (100 ug/mL)
• Mammalian Cell Selection: None
• Sequence Data:
  Fully Sequenced ORF

  >OriGene ORF within SC108036 sequence for NM_020957 edited (data generated by NextGen Sequencing); ATGGAGATTGGATGGATGCACAATCGGAGACAAAGGCAAGTCCTTGTTTTCTTTGTTTTG; CTGAGCTTGTCTGGGGCGGGCGCCGAGTTGGGGTCCTATTCCGTAGTGGAAGAAACGGAG; AGAGGCTCTTTTGTGGCAAATCTAGGAAAAGACCTGGGGTTGGGGTTGACAGAGATGTCC; ACCCGCAAGGCCAGGATCATTTCCCAGGGGAACAAACAGCATTTGCAGCTCAAGGCTCAA; ACTGGGGATTTGCTCATAAATGAGAAGCTAGATCGAGAGGAGCTATGCGGTCCCACTGAG; CCTTGCATACTACATTTCCAAGTGTTAATGGAAAACCCTTTAGAAATATTTCAGGCTGAA; CTGAGGGTGATAGATATAAATGACCATTCTCCCATGTTCACTGAAAAGGAAATGATTCTA; AAAATACCGGAAAACAGTCCTCTAGGAACTGAGTTCCCTCTGAATCATGCTTTGGACTTG; GACGTAGGAAGCAATAATGTTCAAAACTATAAAATCAGCCCAAGCTCTCATTTCCGGGTT; CTAATCCATGAATTCAGAGATGGCAGGAAATACCCTGAGCTAGTGTTGGATAAAGAGCTG; GATCGGGAGGAGGAGCCTCAACTAAGATTAACCCTGACAGCGCTGGATGGTGGCTCTCCA; CCGCGATCTGGAACTGCTCAGGTCCGTATTGAAGTGGTGGACATCAATGATAACGCTCCT; GAGTTTGAGCAGCCCATCTACAAAGTGCAGATTCCAGAGAACAGTCCTCTTGGCTCCCTG; GTTGCCACCGTCTCCGCCAGGGATTTAGACGGCGGAGCCAATGGAAAAATATCATACACA; CTCTTTCAGCCTTCGGAGGATATTAGTAAAACTTTGGAGGTAAATCCTATGACAGGGGAA; GTTCGACTGAGAAAGCAAGTAGATTTCGAAATGGTTACGTCTTATGAAGTGCGCATCAAA; GCCACAGATGGGGGAGGTCTTTCAGGAAAGTGCACTCTTCTCCTGCAGGTGGTGGACGTG; AATGACAATCCCCCACAGGTGACCATGTCTGCACTCACCAGCCCCATCCCAGAGAACTCG; CCTGAGATAGTAGTTGCTGTTTTCAGCGTTTCAGATCCTGACTCCGGAAACAATGGGAAG; ACGATTTCCTCCATCCAGGAAGACCTTCCCTTTCTTCTAAAACCTTCAGTCAAGAACTTT; TACACCTTGGTAACGGAGAGAGCACTCGACAGAGAAGCAAGAGCTGAATATAATATCACC; CTCACCGTCACAGATATGGGGACTCCAAGGCTGAAAACGGAGCACAACATAACAGTGCAG; ATATCAGATGTCAATGATAACGCCCCCACTTTCACCCAAACCTCCTACACCCTGTTCGTC; CGCGAGAACAACAGCCCCGCCCTGCACATCGGCAGCGTCAGCGCCACAGACAGAGACTCA; GGCATCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCAGGACCCGCACCTGCCCCTC; GCCTCCCTGGTCTCCATCAACGCAGACAACGGCCACCTGTTCGCCCTCAGGTCGCTGGAC; TACGAGGCCCTGCGGGAGTTCGAGTTCCGCGTGAGCGCCACAGACCGCGGCTCCCCGGCT; TTGAGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTC; GTGCTGTACCCGCTGCAGAACGGCTCCGCGCCCTGCACTGAGCTGGTGCCCCGGGCGGCC; GAGCCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCC; TGGCTGTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGTGTGTGGGCGCAC; AATGGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCAGCCAAGCACAGGCTG; GTGGTGCTGGTCAAGGACAATGGCGAGCCTCCGTGCTCGGCCACCGCCACGCTGCACGTG; CTCCTGGTGGACGGCTTCTCCCAGCCCTTCCTGCCGCTCCCAGAGGCGGCCCCCGGCCAG; ACCCAGGCCAACTCGCTCACTGTCTACCTGGTGGTGGCGTTGGCCTCGGTGTCGTCGCTC; TTCCTCTTTTCGGTGCTCCTGTTCGTGGTGGTGCGGCTGTGCAGGAGGAGCAGGGCGGCC; TCGGTGGGCCGCTGCTCGATGCCTGAGGGCCCCTTTCCAGGGCGTCTGGTGGACGTAAGC; GGCACCGGGACCCTGTCCCAGAGCTACCAATACGAGGTGTGTCTGACAGGAGGCTCAGAA; ACAAGTGAGTTCAAGTTCCTGAAGCCGATTATCCCCAACTTCTCTCCTTAG; ; Clone variation with respect to NM_020957.1; 1445 c=>t;1797 t=>c;1914 g=>c;1954 c=>t;2129 c=>t
  5' Read Nucleotide Sequence

  >OriGene 5' read for NM_020957 unedited; CGTTCACATTTTGTAATACGACTTCACTATAGGGCGGCCGCGAATTCGCACGAGGGAGTG; TGAAACCTCTTTAAGACACCGTTGGGCTGCTTGGTTCTGACATTCTGGACTGCAAAACAG; TTCTACTAGGATCCTGGGGATACATGAAGCTTCTGTGAACCAACTTTTCAAGAAAAAGCA; ATGGAGATTGGATGGATGCACAATCGGAGACAAAGGCAAGTCCTTGTTTTCTTTGTTTTG; CTGAGCTTGTCTGGGGCGGGCGCCGAGTTGGGGTCCTATTCCGTAGTGGAAGAAACGGAG; AGAGGCTCTTTTGTGGCAAATCTAGGAAAAGACCTGGGGTTGGGGTTGACAGAGATGTCC; ACCCGCAAGGCCAGGATCATTTCCCAGGGGAACAAACAGCATTTGCAGCTCAAGGCTCAA; ACTGGGGATTTGCTCATAAATGAGAAGCTAGATCGAGAGGAGCTATGCGGTCCCACTGAG; CCTTGCATACTACATTTCCAAGTGTTAATGGAAAACCCTTTAGAAATATTTCAGGCTGAA; CTGAGGGTGATAGATATAAATGACCATTCTCCCATGTTCACTGAAAAGGAAATGATTCTA; AAAATACCGGANAACAGTCCTCTAGGAACTGAGTTCCCTCTGAATCATGCTTTGGACTTG; GACGTANGAAGCAATAATGTTCAAAACTATAAAATCAGCCCAAGCTCTCATTTCCGGGTT; CTAATCCATGAATTCAGAGATGGCANGAAATACCCTGAGCTAGTGTTGGATAAAGAGCTG; GATCGGGAGGAGGAGCCTCACTAAGATAACCCTGAAGCGCTGGATGGTGGCTCTCACCGC; GATCTGAACTGCTCAGTCCGTATGAAGTGGTGACATCATGATACGCTCCTGAGTTGACAG; CCATCTACAA;
  3' Read Nucleotide Sequence

  >OriGene 3' read for NM_020957 unedited; GACCGCGGCCGCAATCTAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTAAATCTGACTCAC; ATAGAATTTTATTCAAAGGCCTAATATCTAGAAAGAAGCTCAACTTTACATATAATAAGC; AAGAAATACAGATTAAACATAGGGATATTTTACAGAGAAAGGGCTAGATACCGCCAATGT; ATACTATGATGAATATAAAAGCCAAACCATGTAAATGTCTCTTTGATAAGTTTTTTTTCC; AACTTAATGAGATTGAGTTGTTAGCCATTAAAAATATAACAGGGACCTCTGATTTTTTAA; TTCAGTAATAGAAAGAATAAATTATTAAATATTTTTACATAATACCTTTGCCTTTTGTCT; ACAAACACAAACACATTTACACATACTGAATGTCTTACAATGGCTTCTCTTTTTATTTTT; AGATAAGGCTGGTTAAAGATTTCTCATATCACTTACAATAGGAATATTTTATTTTATTTA; AGGAGATACCAATACAGGGAAAATAGAACTTTTTTTTTAAAGGTAACTTTACGAGACTCC; ATCTCAAAAAAATAAATAAATAAAACTTTGGATGGGCACATTGGCTTATGCCTGTAATCC; CAGAATTTTGGGAGGCTGAGGAGGNAAGGATGGTTTGAGCCCAGGAGTTAAAGATCAGCC; TGGGCAACTTGGCAAAATCCATCGCTGCAAAAGATTAGCAGCATTGGNGGCATGCCCCTA; TGTCCAAGCTACTGGAAGGTTAGGGGAAGGGACCTTTCCCCCATAGGGCCAGTTCGATGA; CCACACTTTCCCCTCACTCCACCTGGTCCATAACACACCCTGCCCTACAGGAAGCTCCAA; CGAACGCCGAATCAACTACGACCCCCGAAACTCTTTTTTAATTTGTCTCCAATATCATTC; TGCAGGACACCACCATAAACCCCCCCGCCTTCTACCCGCTCGCTTTTTCCTCCGCCCCCC; GCCCATTCTCTATCCCCTCCGCCCCCTTCCCTTTCGTCC;
• Restriction Sites: NotI-NotI
• ACCN: NM_020957
• Insert Size: 3810 bp
• OTI Disclaimer: Our molecular clone sequence data has been matched to the reference identifier above as a point of reference. Note that the complete sequence of our molecular clones may differ from the sequence published for this corresponding reference, e.g., by representing an alternative RNA splicing form or single nucleotide polymorphism (SNP).
• Components: The ORF clone is ion-exchange column purified and shipped in a 2D barcoded Matrix tube containing 10ug of transfection-ready, dried plasmid DNA (reconstitute with 100 ul of water).
• Reconstitution Method: 1. Centrifuge at 5,000xg for 5min.; 2. Carefully open the tube and add 100ul of sterile water to dissolve the DNA.; 3. Close the tube and incubate for 10 minutes at room temperature.; 4. Briefly vortex the tube and then do a quick spin (less than 5000xg) to concentrate the liquid at the bottom.; 5. Store the suspended plasmid at -20°C. The DNA is stable for at least one year from date of shipping when stored at -20°C.
• Note: Plasmids are not sterile. For experiments where strict sterility is required, filtration with 0.22um filter is required.
• Shipping: Ambient

Reference Data

• RefSeq: NM_020957.1, NP_066008.1
• RefSeq Size: 4827 bp
• RefSeq ORF: 2331 bp
• Locus ID: 57717
• UniProt ID: Q9NRJ7
• Cytogenetics: 5q31.3
• Domains: CA
• Protein Families: Druggable Genome, Transmembrane
• Summary: This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The beta cluster contains 16 genes and 3 pseudogenes, each encoding 6 extracellular cadherin domains and a cytoplasmic tail that deviates from others in the cadherin superfamily. The extracellular domains interact in a homophilic manner to specify differential cell-cell connections. Unlike the alpha and gamma clusters, the transcripts from these genes are made up of only one large exon, not sharing common 3' exons as expected. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins. Their specific functions are unknown but they most likely play a critical role in the establishment and function of specific cell-cell neural connections. [provided by RefSeq, Jul 2008]