PTBP1 (NM_031990) Human Untagged Clone

SKU SC106769

PTBP1 (untagged)-Human polypyrimidine tract binding protein 1 (PTBP1), transcript variant 2

Product Data

• Type: Human Untagged Clone
• Target Symbol: PTBP1
• Synonyms: HNRNP-I; HNRNPI; HNRPI; pPTB; PTB; PTB-1; PTB-T; PTB2; PTB3; PTB4
• Vector: pCMV6-XL5
• E. coli Selection: Ampicillin (100 ug/mL)
• Mammalian Cell Selection: None
• Sequence Data:
  Fully Sequenced ORF

  >OriGene ORF within SC106769 sequence for NM_031990 edited (data generated by NextGen Sequencing); ATGGACGGCATTGTCCCAGATATAGCCGTTGGTACAAAGCGGGGATCTGACGAGCTTTTC; TCTACTTGTGTCACTAACGGACCGTTTATCATGAGCAGCAACTCGGCTTCTGCAGCAAAC; GGAAATGACAGCAAGAAGTTCAAAGGTGACAGCCGAAGTGCAGGCGTCCCCTCTAGAGTG; ATCCACATCCGGAAGCTCCCCATCGACGTCACGGAGGGGGAAGTCATCTCCCTGGGGCTG; CCCTTTGGGAAGGTCACCAACCTCCTGATGCTGAAGGGGAAAAACCAGGCCTTCATCGAG; ATGAACACGGAGGAGGCTGCCAACACCATGGTGAACTACTACACCTCGGTGACCCCTGTG; CTGCGCGGCCAGCCCATCTACATCCAGTTCTCCAACCACAAGGAGCTGAAGACCGACAGC; TCTCCCAACCAGGCGCGGGCCCAGGCGGCCCTGCAGGCGGTGAACTCGGTCCAGTCGGGG; AACCTGGCCTTGGCTGCCTCGGCGGCGGCCGTGGACGCAGGGATGGCGATGGCCGGGCAG; AGCCCCGTGCTCAGGATCATCGTGGAGAACCTCTTCTACCCTGTGACCCTGGATGTGCTG; CACCAGATTTTCTCCAAGTTCGGCACAGTGTTGAAGATCATCACCTTCACCAAGAACAAC; CAGTTCCAGGCCCTGCTGCAGTATGCGGACCCCGTGAGCGCCCAGCACGCCAAGCTGTCG; CTGGACGGGCAGAACATCTACAACGCCTGCTGCACGCTGCGCATCGACTTTTCCAAGCTC; ACCAGCCTCAACGTCAAGTACAACAATGACAAGAGCCGTGACTACACACGCCCAGACCTG; CCTTCCGGGGACAGCCAGCCCTCGCTGGACCAGACCATGGCCGCGGCCTTCGCCTCTCCG; TATGCAGGAGCTGGTTTCCCTCCCACCTTTGCCATTCCTCAAGCTGCAGGCCTTTCCGTT; CCGAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGCAGCTGCG; GCGGCAGGTCGGATCGCCATCCCGGGCCTGGCGGGGGCAGGAAATTCTGTATTGCTGGTC; AGCAACCTCAACCCAGAGAGAGTCACACCCCAAAGCCTCTTTATTCTTTTCGGCGTCTAC; GGTGACGTGCAGCGCGTGAAGATCCTGTTCAATAAGAAGGAGAACGCCCTAGTGCAGATG; GCGGACGGCAACCAGGCCCAGCTGGCCATGAGCCACCTGAACGGGCACAAGCTGCACGGG; AAGCCCATCCGCATCACGCTCTCGAAGCACCAGAACGTGCAGCTGCCCCGCGAGGGCCAG; GAGGACCAGGGCCTGACCAAGGACTACGGCAACTCACCCCTGCACCGCTTCAAGAAGCCG; GGCTCCAAGAACTTCCAGAACATATTCCCGCCCTCGGCCACGCTGCACCTCTCCAACATC; CCGCCCTCAGTCTCCGAGGAGGATCTCAAGGTCCTGTTTTCCAGCAATGGGGGCGTCGTC; AAAGGATTCAAGTTCTTCCAGAAGGACCGCAAGATGGCACTGATCCAGATGGGCTCCGTG; GAGGAGGCGGTCCAGGCCCTCATTGACCTGCACAACCACGACCTCGGGGAGAACCACCAC; CTGCGGGTCTCCTTCTCCAAGTCCACCATCTAG; ; Clone variation with respect to NM_031990.3;
  5' Read Nucleotide Sequence

  >OriGene 5' read for NM_031990 unedited; TTTTGTAATACGACTCACTATAGGGCGGCCGCGAATTCGGCACGAGGCTCCACTCCGTCC; CCCGCGGGTCTGCTCTGTGTGCCATGGACGGCATTGTCCCAGATATAGCCGTTGGTACAA; AGCGGGGATCTGACGAGCTTTTCTCTACTTGTGTCACTAACGGACCGTTTATCATGAGCA; GCAACTCGGCTTCTGCAGCAAACGGAAATGACAGCAAGAAGTTCAAAGGTGACAGCCGAA; GTGCAGGCGTCCCCTCTAGAGTGATCCACATCCGGAAGCTCCCCATCGACGTCACGGAGG; GGGAAGTCATCTCCCTGGGGCTGCCCTTTGGGAAGGTCACCAACCTCCTGATGCTGAAGG; GGAAAAACCAGGCCTTCATCGAGATGAACACGGAGGAGGCTGCCAACACCATGGTGAACT; ACTACACCTCGGTGACCCCTGTGCTGCGCGGCCAGCCCATCTACATCCAGTTCTCCAACC; ACAAGGAGCTGAAGACCGACAGCTCTCCCAACCAGGCGCGGGCCCAGGCGGCCCTGCAGG; CGGTGAACTCGGTCCAGTCGGGGAACCTGGCCTTGGCTGCCTCGGCGGCGGCCGTGGACG; CAGGGATGGCGATGGCCGGGCAGAGCCCCGTGCTCAGGATCATCGTGGAGAACCTCTTCT; ACCCTGTGACCCTGGATGTGCTGCACCAAATTNTCTCCAAGTTCGGCACAGTGTTGAAGA; TCATCACCTTCACCAAGAAACACCAGTTCCAGGCCCCTGCTGCAGTATGCGGACCCCGTG; AACCGCCCAACACGCAAGCTGGTCCCTGGACGGGCAGACATCTACAACGCCTGGTGCCCG; CTGGGCATCGACTTTTCAAGCTCACCGGCTCACGTCAAGTACACCATGACAAGAGCGGGA; CTACCACCCCAGACCTG;
  3' Read Nucleotide Sequence

  >OriGene 3' read for NM_031990 unedited; GCCCGTTTCTATATCGAGTTTTTTTTTTTTTTTTTTGGAGTTTCTGAAACGGTTTTAATC; GGTTCTCTCCGCGTCACAAGCCATCGGGTAAGGCAACGGTAATGTGCGTGGGGTCCCCTG; TGGCTTCGTGGTTACAATACTGAGCCTGGAATTGCTGTTAGCAAAATATACATTTGTGTC; ACCATAAAAAACCGCGCCGTCGTCCCTCGGGTCTTACAACAGGTATAAAAAATTATAAAT; ATTTACACCCTTGTTACACGCTTTTACGGAAAGGGGATCCTAAGATAGCCCCCGGGACAG; GACTCGGGGGCGGCACAAAGAGCACAATGACAGGATCGCCCGTCTTTCGGGTTCATCCTC; CTAGGCAGGTTTAACACAGAAATGAGACTTTGGCGCAAAATTTGAAGGAAGAAAAAACCC; TGAAGTTTGAGAGCAAGTTTTTTATGCGACTGCTGGTGAAAGCGTGGTGCAATGCTACCG; GAGGCGATGTCAGAGGCGGTGACACCTTCGCCCCTTACCTGAAGCTTAAGGGCTCTAACA; TAGGACCGGGGCTACCTGTGTCTGACCCATGGGCGGTCCCGTCTGCTCTCTGGAACCTGG; TTAGGACCGGGCTTTCTGTGCCTGCCCACTGGGCGGTCCCGCCTGCTTTCTGGAAACTGG; GGTCTGCCTGTGCCTTATTTCCAGGAATAAATACAGCTACAGCGTCCAGGGCATACCCCT; GGAAATTTTATTTCCCTCCACCCTTGAGTCTCACTGCATAAAAGATACTAAAATATTCCT; TTTGCTTTAATGGATAAGATTCCATATCTGGCTACCGGCAAATTGCTAGGCCACACCTTG; CTCTGCTAGTTTTATTTAGATATTTTTCTTCCCTCCCTACTGAAACCCGGGACCCATTGG; GTGCATAGATAGCCCGGGGCGGGAAAGGAATTCCGTCTGTTAAGGCGGGCGGGGTTCTCC; CC;
• Restriction Sites: NotI-NotI
• ACCN: NM_031990
• Insert Size: 3070 bp
• OTI Disclaimer: Our molecular clone sequence data has been matched to the reference identifier above as a point of reference. Note that the complete sequence of our molecular clones may differ from the sequence published for this corresponding reference, e.g., by representing an alternative RNA splicing form or single nucleotide polymorphism (SNP).
• Components: The ORF clone is ion-exchange column purified and shipped in a 2D barcoded Matrix tube containing 10ug of transfection-ready, dried plasmid DNA (reconstitute with 100 ul of water).
• Reconstitution Method: 1. Centrifuge at 5,000xg for 5min.; 2. Carefully open the tube and add 100ul of sterile water to dissolve the DNA.; 3. Close the tube and incubate for 10 minutes at room temperature.; 4. Briefly vortex the tube and then do a quick spin (less than 5000xg) to concentrate the liquid at the bottom.; 5. Store the suspended plasmid at -20°C. The DNA is stable for at least one year from date of shipping when stored at -20°C.
• Note: Plasmids are not sterile. For experiments where strict sterility is required, filtration with 0.22um filter is required.
• Shipping: Ambient

Reference Data

• RefSeq: NM_031990.2, NP_114367.1
• RefSeq Size: 3300 bp
• RefSeq ORF: 1653 bp
• Locus ID: 5725
• UniProt ID: P26599
• Cytogenetics: 19p13.3
• Domains: RRM
• Protein Families: Druggable Genome
• Summary: This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA-binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has four repeats of quasi-RNA recognition motif (RRM) domains that bind RNAs. This protein binds to the intronic polypyrimidine tracts that requires pre-mRNA splicing and acts via the protein degradation ubiquitin-proteasome pathway. It may also promote the binding of U2 snRNP to pre-mRNAs. This protein is localized in the nucleoplasm and it is also detected in the perinucleolar structure. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008]; Transcript Variant: This variant (2) uses an alternative splice site resulting in it lacking 21 nt in the coding region compared to variant 1. Thus isoform b is 7 aa shorter than isoform a, but it maintains the same reading frame.